Current projects (click for more details):


method for extracting rules from
Deep Neural Networks.


In silico prediction of
phage-bacteria infection networks

BOSS Explorer

new methods for exploration,
selection, and visualization of diagnostic signatures.


a fast, cost-effective,
user-friendly and in-field screening testFISHGUARD


Machine Learning Diagnostic Soil

Recent projects:

  1. HP-FuzzyBio: High-peformance Pipeline for Fuzzy Modelling in Bioinformatics. 2013-2014. National Funding: RCSO. In collaboration with Hepia (Geneva University of Applied Sciences)

  2. DiagnoSuite: Suite of data analysis and data management tools for discovering, developing, deploying, and exploiting biomarker-based diagnostic screening tests. 2013-2014. National Funding: CTI Agency. In collaboration with Diagnoplex SA, Epalinges, Switzerland.

  3. nanoFUGE: FUzzy modelling Gene-Expression data from Nanostring technology. 2010-2014. National Funding: SNSF Project. In collaboration with the University of Geneva and the University Hospitals of Geneva. In the frame of the SNSF Project “Leukaemia diagnosis using Nanotechnology”.

  4. ISyPeM: Intelligent Integrated Systems for Personalized Medicine. 2010-2013. National Funding: Nano-Tera Initiative. Member of a large consortium of several Swiss universities.

  5. TIC4AGRO: Revealing new opportunities for small-scale fruit growers in Colombia by harnessing time in a collaborative site-specific agricultural setup. 2012. National funding: KFH Agency.

  6. Smart Building. Système de gestion énergétique des bâtiments basé sur des techniques d’intelligence artificielle (System for energetic management of buildings based on artificial intelligence). 2010-2012. National funding: RCSO. In collaboration with Fribourg University of Applied Sciences.

  7. PharMEA: Multi-Electrode Array technology based platform for industrial pharmacology and toxicology drug screening. 2009-2011. European Funding: FP7 European project, Research for SMEs instrument. In collaboration with a consortium of several European universities and SMEs.

  8. HiperBio. High-performance reconfigurable computing toolset and development methodology for bioinformatics and computational biology applications. 2009-2010. National funding: RCSO.

  9. NavMedia: Navigation and exploration of self-organized business media. 2008-2009. National Funding: CTI Agency. In collaboration with the Ipseité SA, Ecublens, Switzerland.

  10. MyDeskPerso: Moteur de personnalité artificielle pour le robot-jouet Mydeskfriend. 2008-2009. National Funding: CTI Agency. In collaboration with Arimaz SA, Renens, Switzerland.

  11. FASTPricer: FPGA-based Accelerating Solution for Parallel Synthetic CDO Pricer. 2008-2009. National Funding: CTI Agency. In collaboration with Risk Metrics Group and IOxOS Technologies, Switzerland.